Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.8■□□□□ 0.6
Pdlim2Q8R1G6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim2Q8R1G6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.8■□□□□ 0.6
Pdlim2Q8R1G6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim2Q8R1G6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim2Q8R1G6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Gm7514-201ENSMUST00000209475 934 ntBASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Gm37019-201ENSMUST00000192133 2134 ntBASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim2Q8R1G6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Pdlim2Q8R1G6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim2Q8R1G6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdlim2Q8R1G6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdlim2Q8R1G6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim2Q8R1G6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim2Q8R1G6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms