Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ddx54Q8K4L0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Gm2308-201ENSMUST00000166539 1004 ntBASIC21.31■■□□□ 1
Ddx54Q8K4L0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC21.31■■□□□ 1
Ddx54Q8K4L0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx54Q8K4L0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ddx54Q8K4L0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx54Q8K4L0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ddx54Q8K4L0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC21.3■■□□□ 1
Ddx54Q8K4L0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC21.3■■□□□ 1
Ddx54Q8K4L0 Gm37153-201ENSMUST00000193637 231 ntBASIC21.3■■□□□ 1
Ddx54Q8K4L0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ddx54Q8K4L0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx54Q8K4L0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC21.3■■□□□ 1
Ddx54Q8K4L0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ddx54Q8K4L0 AC131187.1-201ENSMUST00000224567 809 ntBASIC21.3■■□□□ 1
Ddx54Q8K4L0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx54Q8K4L0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx54Q8K4L0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ddx54Q8K4L0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ddx54Q8K4L0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx54Q8K4L0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx54Q8K4L0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ddx54Q8K4L0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Gm8825-201ENSMUST00000182565 998 ntBASIC21.29■■□□□ 1
Ddx54Q8K4L0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ddx54Q8K4L0 Fgf17-202ENSMUST00000227123 1336 ntBASIC21.29■■□□□ 1
Ddx54Q8K4L0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 AC140375.2-201ENSMUST00000225283 584 ntBASIC21.28■■□□□ 1
Ddx54Q8K4L0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx54Q8K4L0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Gm25948-201ENSMUST00000175334 112 ntBASIC21.27■■□□□ 1
Ddx54Q8K4L0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ddx54Q8K4L0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms