Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Gm22325-201ENSMUST00000158904 308 ntBASIC10.29□□□□□ -0.76
Cystm1Q8K353 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.29□□□□□ -0.76
Cystm1Q8K353 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cystm1Q8K353 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Gm37019-201ENSMUST00000192133 2134 ntBASIC10.28□□□□□ -0.76
Cystm1Q8K353 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Gm2399-201ENSMUST00000104944 225 ntBASIC10.28□□□□□ -0.76
Cystm1Q8K353 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cystm1Q8K353 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cystm1Q8K353 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cystm1Q8K353 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cystm1Q8K353 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Cystm1Q8K353 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cystm1Q8K353 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cystm1Q8K353 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cystm1Q8K353 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cystm1Q8K353 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms