Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Alx1Q8C8B0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Gm15165-201ENSMUST00000118140 502 ntBASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Alx1Q8C8B0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Gm17971-201ENSMUST00000190239 806 ntBASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Alx1Q8C8B0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Alx1Q8C8B0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Alx1Q8C8B0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Alx1Q8C8B0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Alx1Q8C8B0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Alx1Q8C8B0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Alx1Q8C8B0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Alx1Q8C8B0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19■□□□□ 0.63
Alx1Q8C8B0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19■□□□□ 0.63
Alx1Q8C8B0 Gm34391-201ENSMUST00000203706 907 ntBASIC19■□□□□ 0.63
Alx1Q8C8B0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Birc2-201ENSMUST00000054878 378 ntBASIC19■□□□□ 0.63
Alx1Q8C8B0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19■□□□□ 0.63
Alx1Q8C8B0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Alx1Q8C8B0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms