Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rft1Q8C3B8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.61□□□□□ -0.07
Rft1Q8C3B8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rft1Q8C3B8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rft1Q8C3B8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rft1Q8C3B8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rft1Q8C3B8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rft1Q8C3B8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Gm15565-201ENSMUST00000118890 427 ntBASIC14.6□□□□□ -0.07
Rft1Q8C3B8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Gm3375-201ENSMUST00000203929 796 ntBASIC14.6□□□□□ -0.07
Rft1Q8C3B8 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Rft1Q8C3B8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Gm30025-201ENSMUST00000218555 728 ntBASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rft1Q8C3B8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rft1Q8C3B8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rft1Q8C3B8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rft1Q8C3B8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rft1Q8C3B8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Rft1Q8C3B8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rft1Q8C3B8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rft1Q8C3B8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rft1Q8C3B8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms