Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.07■□□□□ 0.48
Trim47Q8C0E3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim47Q8C0E3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim47Q8C0E3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Rprl3-201ENSMUST00000157400 290 ntBASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim47Q8C0E3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Gm15372-201ENSMUST00000120729 834 ntBASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Birc2-201ENSMUST00000054878 378 ntBASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim47Q8C0E3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Gm24589-201ENSMUST00000116692 94 ntBASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim47Q8C0E3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms