Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.87■□□□□ 0.29
Trub1Q8C0D0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trub1Q8C0D0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trub1Q8C0D0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trub1Q8C0D0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Mir770-201ENSMUST00000103252 94 ntBASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trub1Q8C0D0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trub1Q8C0D0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trub1Q8C0D0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Trub1Q8C0D0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trub1Q8C0D0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trub1Q8C0D0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Mir7071-201ENSMUST00000184847 69 ntBASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms