Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim35Q8C006 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim35Q8C006 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim35Q8C006 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Gm25507-201ENSMUST00000116981 144 ntBASIC17.03■□□□□ 0.32
Trim35Q8C006 Gm11510-201ENSMUST00000120278 347 ntBASIC17.03■□□□□ 0.32
Trim35Q8C006 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.03■□□□□ 0.32
Trim35Q8C006 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Gm37638-201ENSMUST00000194337 1123 ntBASIC17.03■□□□□ 0.32
Trim35Q8C006 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim35Q8C006 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim35Q8C006 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim35Q8C006 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim35Q8C006 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim35Q8C006 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim35Q8C006 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim35Q8C006 Gm8988-201ENSMUST00000155015 1240 ntBASIC17.02■□□□□ 0.32
Trim35Q8C006 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim35Q8C006 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 Gm29664-201ENSMUST00000191125 463 ntBASIC17.02■□□□□ 0.32
Trim35Q8C006 Gm10517-202ENSMUST00000192970 758 ntBASIC17.02■□□□□ 0.32
Trim35Q8C006 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Trim35Q8C006 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.02■□□□□ 0.32
Trim35Q8C006 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim35Q8C006 Vmn1r89-206ENSMUST00000227319 985 ntBASIC17.02■□□□□ 0.32
Trim35Q8C006 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim35Q8C006 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim35Q8C006 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim35Q8C006 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim35Q8C006 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.02■□□□□ 0.31
Trim35Q8C006 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim35Q8C006 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim35Q8C006 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim35Q8C006 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim35Q8C006 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Trim35Q8C006 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim35Q8C006 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim35Q8C006 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim35Q8C006 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim35Q8C006 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.01■□□□□ 0.31
Trim35Q8C006 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC17.01■□□□□ 0.31
Trim35Q8C006 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim35Q8C006 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim35Q8C006 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim35Q8C006 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim35Q8C006 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim35Q8C006 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim35Q8C006 Gm34272-201ENSMUST00000208886 253 ntBASIC17.01■□□□□ 0.31
Trim35Q8C006 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim35Q8C006 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim35Q8C006 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim35Q8C006 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms