Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.81□□□□□ -0.36
Chd9Q8BYH8 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Thap2-203ENSMUST00000218989 527 ntBASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd9Q8BYH8 Gm13829-201ENSMUST00000119600 138 ntBASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.79□□□□□ -0.36
Chd9Q8BYH8 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Chd9Q8BYH8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Chd9Q8BYH8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms