Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam43aQ8BUP8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.23■□□□□ 0.51
Fam43aQ8BUP8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam43aQ8BUP8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam43aQ8BUP8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Fam43aQ8BUP8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam43aQ8BUP8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam43aQ8BUP8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam43aQ8BUP8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam43aQ8BUP8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Gm13216-201ENSMUST00000117145 591 ntBASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fam43aQ8BUP8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Fam43aQ8BUP8 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.21■□□□□ 0.5
Fam43aQ8BUP8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
Fam43aQ8BUP8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.21■□□□□ 0.5
Fam43aQ8BUP8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Gm24841-201ENSMUST00000158676 357 ntBASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam43aQ8BUP8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Fam43aQ8BUP8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms