Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Gm33142-201ENSMUST00000193913 867 ntBASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.61■□□□□ 0.25
Sfr1Q8BP27 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Gm45328-201ENSMUST00000210942 917 ntBASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sfr1Q8BP27 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.59■□□□□ 0.25
Sfr1Q8BP27 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sfr1Q8BP27 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sfr1Q8BP27 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sfr1Q8BP27 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.59■□□□□ 0.25
Sfr1Q8BP27 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sfr1Q8BP27 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sfr1Q8BP27 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sfr1Q8BP27 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sfr1Q8BP27 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Sfr1Q8BP27 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sfr1Q8BP27 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sfr1Q8BP27 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sfr1Q8BP27 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sfr1Q8BP27 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sfr1Q8BP27 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sfr1Q8BP27 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sfr1Q8BP27 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sfr1Q8BP27 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Gm13216-201ENSMUST00000117145 591 ntBASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sfr1Q8BP27 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms