Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cdhr3Q8BL00 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdhr3Q8BL00 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.27□□□□□ -0.12
Cdhr3Q8BL00 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdhr3Q8BL00 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdhr3Q8BL00 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Cdhr3Q8BL00 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cdhr3Q8BL00 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdhr3Q8BL00 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdhr3Q8BL00 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.27□□□□□ -0.12
Cdhr3Q8BL00 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdhr3Q8BL00 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdhr3Q8BL00 Gm13168-201ENSMUST00000121771 632 ntBASIC14.27□□□□□ -0.13
Cdhr3Q8BL00 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdhr3Q8BL00 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.27□□□□□ -0.13
Cdhr3Q8BL00 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdhr3Q8BL00 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cdhr3Q8BL00 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdhr3Q8BL00 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdhr3Q8BL00 Phf7-203ENSMUST00000226565 1971 ntBASIC14.27□□□□□ -0.13
Cdhr3Q8BL00 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdhr3Q8BL00 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdhr3Q8BL00 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.27□□□□□ -0.13
Cdhr3Q8BL00 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cdhr3Q8BL00 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Gm715-201ENSMUST00000117865 831 ntBASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Gm29257-201ENSMUST00000186115 639 ntBASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr3Q8BL00 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms