Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Gm7370-201ENSMUST00000219471 767 ntBASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc40Q8BI79 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Gm13559-201ENSMUST00000120476 863 ntBASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc40Q8BI79 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc40Q8BI79 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc40Q8BI79 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc40Q8BI79 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc40Q8BI79 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc40Q8BI79 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc40Q8BI79 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.02■□□□□ 0.31
Ccdc40Q8BI79 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc40Q8BI79 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc40Q8BI79 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ccdc40Q8BI79 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc40Q8BI79 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc40Q8BI79 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc40Q8BI79 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc40Q8BI79 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17■□□□□ 0.31
Ccdc40Q8BI79 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc40Q8BI79 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc40Q8BI79 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17■□□□□ 0.31
Ccdc40Q8BI79 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc40Q8BI79 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc40Q8BI79 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc40Q8BI79 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms