Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.17■□□□□ 0.66
Samm50Q8BGH2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Gm18032-201ENSMUST00000222541 538 ntBASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.16■□□□□ 0.66
Samm50Q8BGH2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Samm50Q8BGH2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.15■□□□□ 0.66
Samm50Q8BGH2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Samm50Q8BGH2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Samm50Q8BGH2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Samm50Q8BGH2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Samm50Q8BGH2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Samm50Q8BGH2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Samm50Q8BGH2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Samm50Q8BGH2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Samm50Q8BGH2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Samm50Q8BGH2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Samm50Q8BGH2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Samm50Q8BGH2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Samm50Q8BGH2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Samm50Q8BGH2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Samm50Q8BGH2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Samm50Q8BGH2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Samm50Q8BGH2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Samm50Q8BGH2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Samm50Q8BGH2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Samm50Q8BGH2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Gm6659-201ENSMUST00000174752 547 ntBASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Gm7213-201ENSMUST00000215977 950 ntBASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Samm50Q8BGH2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms