Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Gm5643-201ENSMUST00000117081 966 ntBASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim6Q8BGE7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim6Q8BGE7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim6Q8BGE7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim6Q8BGE7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim6Q8BGE7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim6Q8BGE7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim6Q8BGE7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim6Q8BGE7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim6Q8BGE7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim6Q8BGE7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim6Q8BGE7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim6Q8BGE7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim6Q8BGE7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Gm12085-201ENSMUST00000119263 940 ntBASIC17.35■□□□□ 0.37
Trim6Q8BGE7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim6Q8BGE7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Gm7638-201ENSMUST00000121348 967 ntBASIC17.34■□□□□ 0.37
Trim6Q8BGE7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Gm18958-201ENSMUST00000174258 762 ntBASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms