Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Upk3bQ80YF6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Upk3bQ80YF6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Gm5643-201ENSMUST00000117081 966 ntBASIC13.82□□□□□ -0.2
Upk3bQ80YF6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.82□□□□□ -0.2
Upk3bQ80YF6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Upk3bQ80YF6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Upk3bQ80YF6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Actl10-202ENSMUST00000226583 1501 ntBASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms