Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rpp38Q80UU2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Gm15794-201ENSMUST00000120182 631 ntBASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp38Q80UU2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp38Q80UU2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp38Q80UU2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms