Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Usp8Q80U87 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.4■□□□□ 0.22
Usp8Q80U87 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.4■□□□□ 0.22
Usp8Q80U87 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.4■□□□□ 0.22
Usp8Q80U87 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Usp8Q80U87 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Usp8Q80U87 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.39■□□□□ 0.21
Usp8Q80U87 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp8Q80U87 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Usp8Q80U87 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp8Q80U87 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Usp8Q80U87 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.39■□□□□ 0.21
Usp8Q80U87 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Usp8Q80U87 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Usp8Q80U87 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Usp8Q80U87 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp8Q80U87 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Usp8Q80U87 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Usp8Q80U87 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Usp8Q80U87 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.38■□□□□ 0.21
Usp8Q80U87 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Usp8Q80U87 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.38■□□□□ 0.21
Usp8Q80U87 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.38■□□□□ 0.21
Usp8Q80U87 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.38■□□□□ 0.21
Usp8Q80U87 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
Usp8Q80U87 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Usp8Q80U87 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.38■□□□□ 0.21
Usp8Q80U87 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.38■□□□□ 0.21
Usp8Q80U87 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp8Q80U87 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.37■□□□□ 0.21
Usp8Q80U87 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.37■□□□□ 0.21
Usp8Q80U87 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.37■□□□□ 0.21
Usp8Q80U87 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp8Q80U87 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms