Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Gm28659-201ENSMUST00000188013 759 ntBASIC16■□□□□ 0.15
Pcdh19Q80TF3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Gm12644-201ENSMUST00000119935 606 ntBASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Gm27459-201ENSMUST00000184860 107 ntBASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Gm44454-201ENSMUST00000198541 138 ntBASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh19Q80TF3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh19Q80TF3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Gm15165-201ENSMUST00000118140 502 ntBASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Mir8098-201ENSMUST00000184011 137 ntBASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh19Q80TF3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh19Q80TF3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms