Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.61■□□□□ 0.41
ShbQ6PD21 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShbQ6PD21 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ShbQ6PD21 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShbQ6PD21 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.6■□□□□ 0.41
ShbQ6PD21 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.6■□□□□ 0.41
ShbQ6PD21 Gm27301-201ENSMUST00000184012 127 ntBASIC17.6■□□□□ 0.41
ShbQ6PD21 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.6■□□□□ 0.41
ShbQ6PD21 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.6■□□□□ 0.41
ShbQ6PD21 Gm7787-201ENSMUST00000216858 688 ntBASIC17.6■□□□□ 0.41
ShbQ6PD21 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ShbQ6PD21 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShbQ6PD21 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ShbQ6PD21 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShbQ6PD21 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShbQ6PD21 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShbQ6PD21 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ShbQ6PD21 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShbQ6PD21 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShbQ6PD21 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.59■□□□□ 0.41
ShbQ6PD21 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShbQ6PD21 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ShbQ6PD21 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShbQ6PD21 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.59■□□□□ 0.41
ShbQ6PD21 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.59■□□□□ 0.41
ShbQ6PD21 Gm20553-201ENSMUST00000204205 844 ntBASIC17.59■□□□□ 0.41
ShbQ6PD21 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.59■□□□□ 0.41
ShbQ6PD21 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ShbQ6PD21 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.58■□□□□ 0.41
ShbQ6PD21 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
ShbQ6PD21 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ShbQ6PD21 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ShbQ6PD21 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.58■□□□□ 0.4
ShbQ6PD21 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShbQ6PD21 Gm8344-201ENSMUST00000119813 856 ntBASIC17.58■□□□□ 0.4
ShbQ6PD21 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.58■□□□□ 0.4
ShbQ6PD21 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.58■□□□□ 0.4
ShbQ6PD21 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.58■□□□□ 0.4
ShbQ6PD21 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShbQ6PD21 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.58■□□□□ 0.4
ShbQ6PD21 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
ShbQ6PD21 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ShbQ6PD21 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShbQ6PD21 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ShbQ6PD21 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.58■□□□□ 0.4
ShbQ6PD21 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShbQ6PD21 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShbQ6PD21 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ShbQ6PD21 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.58■□□□□ 0.4
ShbQ6PD21 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.58■□□□□ 0.4
ShbQ6PD21 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ShbQ6PD21 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ShbQ6PD21 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShbQ6PD21 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ShbQ6PD21 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
ShbQ6PD21 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ShbQ6PD21 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.57■□□□□ 0.4
ShbQ6PD21 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShbQ6PD21 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShbQ6PD21 Gm23547-201ENSMUST00000158210 271 ntBASIC17.57■□□□□ 0.4
ShbQ6PD21 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.57■□□□□ 0.4
ShbQ6PD21 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.57■□□□□ 0.4
ShbQ6PD21 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.57■□□□□ 0.4
ShbQ6PD21 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ShbQ6PD21 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShbQ6PD21 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ShbQ6PD21 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShbQ6PD21 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ShbQ6PD21 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ShbQ6PD21 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
ShbQ6PD21 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.56■□□□□ 0.4
ShbQ6PD21 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
ShbQ6PD21 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.56■□□□□ 0.4
ShbQ6PD21 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.56■□□□□ 0.4
ShbQ6PD21 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.56■□□□□ 0.4
ShbQ6PD21 Gm18489-201ENSMUST00000172565 551 ntBASIC17.56■□□□□ 0.4
ShbQ6PD21 Gm18889-201ENSMUST00000174284 929 ntBASIC17.56■□□□□ 0.4
ShbQ6PD21 Gm22175-201ENSMUST00000175007 78 ntBASIC17.56■□□□□ 0.4
ShbQ6PD21 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.56■□□□□ 0.4
ShbQ6PD21 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.56■□□□□ 0.4
ShbQ6PD21 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.56■□□□□ 0.4
ShbQ6PD21 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.56■□□□□ 0.4
ShbQ6PD21 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ShbQ6PD21 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ShbQ6PD21 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShbQ6PD21 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ShbQ6PD21 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms