Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb4Q6P8W9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb4Q6P8W9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.09■□□□□ 0.33
Hmgb4Q6P8W9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb4Q6P8W9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb4Q6P8W9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Hmgb4Q6P8W9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb4Q6P8W9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb4Q6P8W9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb4Q6P8W9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb4Q6P8W9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb4Q6P8W9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb4Q6P8W9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb4Q6P8W9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb4Q6P8W9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Gm43347-201ENSMUST00000200226 580 ntBASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hmgb4Q6P8W9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Gm18421-201ENSMUST00000204122 625 ntBASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb4Q6P8W9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Gm27459-201ENSMUST00000184860 107 ntBASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Gm44450-201ENSMUST00000199528 114 ntBASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hmgb4Q6P8W9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Dancr-204ENSMUST00000132389 2347 ntBASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hmgb4Q6P8W9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms