Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Mir3081-201ENSMUST00000175305 84 ntBASIC17.12■□□□□ 0.33
Scube3Q66PY1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.12■□□□□ 0.33
Scube3Q66PY1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.11■□□□□ 0.33
Scube3Q66PY1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.11■□□□□ 0.33
Scube3Q66PY1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.1■□□□□ 0.33
Scube3Q66PY1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Gm9103-201ENSMUST00000119371 405 ntBASIC17.1■□□□□ 0.33
Scube3Q66PY1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.1■□□□□ 0.33
Scube3Q66PY1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Gm27357-201ENSMUST00000183754 135 ntBASIC17.1■□□□□ 0.33
Scube3Q66PY1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.1■□□□□ 0.33
Scube3Q66PY1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scube3Q66PY1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scube3Q66PY1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scube3Q66PY1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Scube3Q66PY1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Scube3Q66PY1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms