Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.6■□□□□ 0.89
Clcn1Q64347 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn1Q64347 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn1Q64347 Dancr-204ENSMUST00000132389 2347 ntBASIC20.6■□□□□ 0.89
Clcn1Q64347 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn1Q64347 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Clcn1Q64347 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.59■□□□□ 0.89
Clcn1Q64347 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Clcn1Q64347 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.59■□□□□ 0.89
Clcn1Q64347 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Clcn1Q64347 Gm4535-201ENSMUST00000182274 558 ntBASIC20.59■□□□□ 0.89
Clcn1Q64347 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.59■□□□□ 0.89
Clcn1Q64347 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Clcn1Q64347 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.59■□□□□ 0.89
Clcn1Q64347 Gm10355-201ENSMUST00000097146 517 ntBASIC20.59■□□□□ 0.89
Clcn1Q64347 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Clcn1Q64347 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcn1Q64347 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Clcn1Q64347 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clcn1Q64347 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clcn1Q64347 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.58■□□□□ 0.89
Clcn1Q64347 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Clcn1Q64347 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Clcn1Q64347 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Clcn1Q64347 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.58■□□□□ 0.89
Clcn1Q64347 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.58■□□□□ 0.89
Clcn1Q64347 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.58■□□□□ 0.89
Clcn1Q64347 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.58■□□□□ 0.89
Clcn1Q64347 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clcn1Q64347 Psmb5-202ENSMUST00000227257 622 ntBASIC20.58■□□□□ 0.89
Clcn1Q64347 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clcn1Q64347 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Clcn1Q64347 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clcn1Q64347 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clcn1Q64347 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clcn1Q64347 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clcn1Q64347 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Clcn1Q64347 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Clcn1Q64347 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Clcn1Q64347 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.57■□□□□ 0.88
Clcn1Q64347 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.57■□□□□ 0.88
Clcn1Q64347 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.57■□□□□ 0.88
Clcn1Q64347 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.57■□□□□ 0.88
Clcn1Q64347 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Clcn1Q64347 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn1Q64347 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn1Q64347 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn1Q64347 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.56■□□□□ 0.88
Clcn1Q64347 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.56■□□□□ 0.88
Clcn1Q64347 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn1Q64347 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn1Q64347 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn1Q64347 Gm7230-201ENSMUST00000173026 815 ntBASIC20.56■□□□□ 0.88
Clcn1Q64347 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn1Q64347 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.56■□□□□ 0.88
Clcn1Q64347 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.56■□□□□ 0.88
Clcn1Q64347 Haglr-201ENSMUST00000100000 2085 ntBASIC20.56■□□□□ 0.88
Clcn1Q64347 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn1Q64347 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Clcn1Q64347 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.56■□□□□ 0.88
Clcn1Q64347 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn1Q64347 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Clcn1Q64347 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Clcn1Q64347 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.55■□□□□ 0.88
Clcn1Q64347 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn1Q64347 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms