Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Zfp248Q640N4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Zfp248Q640N4 Gm13186-201ENSMUST00000118031 316 ntBASIC12.44□□□□□ -0.42
Zfp248Q640N4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.44□□□□□ -0.42
Zfp248Q640N4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.44□□□□□ -0.42
Zfp248Q640N4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zfp248Q640N4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zfp248Q640N4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zfp248Q640N4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zfp248Q640N4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Zfp248Q640N4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Zfp248Q640N4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.43□□□□□ -0.42
Zfp248Q640N4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Zfp248Q640N4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Gm11539-201ENSMUST00000119837 557 ntBASIC12.42□□□□□ -0.42
Zfp248Q640N4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Gm13474-201ENSMUST00000122466 815 ntBASIC12.42□□□□□ -0.42
Zfp248Q640N4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.42□□□□□ -0.42
Zfp248Q640N4 Gm2274-201ENSMUST00000184539 609 ntBASIC12.42□□□□□ -0.42
Zfp248Q640N4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Gm30025-201ENSMUST00000218555 728 ntBASIC12.42□□□□□ -0.42
Zfp248Q640N4 Gm18115-201ENSMUST00000221209 621 ntBASIC12.42□□□□□ -0.42
Zfp248Q640N4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zfp248Q640N4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zfp248Q640N4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zfp248Q640N4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zfp248Q640N4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Zfp248Q640N4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zfp248Q640N4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Zfp248Q640N4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Zfp248Q640N4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.41□□□□□ -0.42
Zfp248Q640N4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zfp248Q640N4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Zfp248Q640N4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zfp248Q640N4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.41□□□□□ -0.42
Zfp248Q640N4 Gm16061-201ENSMUST00000122167 857 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms