Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col11a1Q61245 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col11a1Q61245 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.2■□□□□ 0.5
Col11a1Q61245 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col11a1Q61245 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col11a1Q61245 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col11a1Q61245 Gm43438-201ENSMUST00000198133 379 ntBASIC18.2■□□□□ 0.5
Col11a1Q61245 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col11a1Q61245 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.2■□□□□ 0.5
Col11a1Q61245 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Col11a1Q61245 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col11a1Q61245 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col11a1Q61245 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col11a1Q61245 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col11a1Q61245 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Col11a1Q61245 Gm12428-201ENSMUST00000119844 727 ntBASIC18.19■□□□□ 0.5
Col11a1Q61245 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.19■□□□□ 0.5
Col11a1Q61245 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.19■□□□□ 0.5
Col11a1Q61245 Gm27622-201ENSMUST00000183779 60 ntBASIC18.19■□□□□ 0.5
Col11a1Q61245 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.19■□□□□ 0.5
Col11a1Q61245 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.19■□□□□ 0.5
Col11a1Q61245 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.19■□□□□ 0.5
Col11a1Q61245 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.19■□□□□ 0.5
Col11a1Q61245 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col11a1Q61245 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Col11a1Q61245 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Col11a1Q61245 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.18■□□□□ 0.5
Col11a1Q61245 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Col11a1Q61245 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Col11a1Q61245 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.18■□□□□ 0.5
Col11a1Q61245 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.18■□□□□ 0.5
Col11a1Q61245 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Col11a1Q61245 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col11a1Q61245 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.17■□□□□ 0.5
Col11a1Q61245 Gm13365-201ENSMUST00000121188 973 ntBASIC18.17■□□□□ 0.5
Col11a1Q61245 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col11a1Q61245 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.17■□□□□ 0.5
Col11a1Q61245 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.17■□□□□ 0.5
Col11a1Q61245 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col11a1Q61245 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Col11a1Q61245 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.16■□□□□ 0.5
Col11a1Q61245 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col11a1Q61245 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col11a1Q61245 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col11a1Q61245 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col11a1Q61245 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col11a1Q61245 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col11a1Q61245 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.16■□□□□ 0.5
Col11a1Q61245 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col11a1Q61245 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.16■□□□□ 0.5
Col11a1Q61245 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.16■□□□□ 0.5
Col11a1Q61245 Gm27301-201ENSMUST00000184012 127 ntBASIC18.16■□□□□ 0.5
Col11a1Q61245 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.16■□□□□ 0.5
Col11a1Q61245 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.16■□□□□ 0.5
Col11a1Q61245 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col11a1Q61245 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col11a1Q61245 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a1Q61245 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a1Q61245 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a1Q61245 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a1Q61245 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Col11a1Q61245 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a1Q61245 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms