Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.17■□□□□ 0.18
Sim1Q61045 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.16■□□□□ 0.18
Sim1Q61045 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.16■□□□□ 0.18
Sim1Q61045 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Gm12644-201ENSMUST00000119935 606 ntBASIC16.16■□□□□ 0.18
Sim1Q61045 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.16■□□□□ 0.18
Sim1Q61045 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Sim1Q61045 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.16■□□□□ 0.18
Sim1Q61045 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sim1Q61045 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Sim1Q61045 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sim1Q61045 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.15■□□□□ 0.18
Sim1Q61045 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 Gm15372-201ENSMUST00000120729 834 ntBASIC16.15■□□□□ 0.18
Sim1Q61045 Gm1401-201ENSMUST00000122048 772 ntBASIC16.15■□□□□ 0.18
Sim1Q61045 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 Gm8000-201ENSMUST00000188378 592 ntBASIC16.15■□□□□ 0.18
Sim1Q61045 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sim1Q61045 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Sim1Q61045 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.15■□□□□ 0.18
Sim1Q61045 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim1Q61045 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sim1Q61045 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim1Q61045 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim1Q61045 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim1Q61045 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Sim1Q61045 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sim1Q61045 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim1Q61045 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sim1Q61045 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.14■□□□□ 0.17
Sim1Q61045 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.14■□□□□ 0.17
Sim1Q61045 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim1Q61045 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sim1Q61045 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sim1Q61045 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim1Q61045 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim1Q61045 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim1Q61045 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim1Q61045 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim1Q61045 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim1Q61045 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sim1Q61045 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.13■□□□□ 0.17
Sim1Q61045 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Sim1Q61045 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Sim1Q61045 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.13■□□□□ 0.17
Sim1Q61045 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.13■□□□□ 0.17
Sim1Q61045 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Sim1Q61045 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.13■□□□□ 0.17
Sim1Q61045 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Sim1Q61045 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Sim1Q61045 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sim1Q61045 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim1Q61045 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim1Q61045 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim1Q61045 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim1Q61045 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sim1Q61045 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sim1Q61045 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.12■□□□□ 0.17
Sim1Q61045 Gm11336-201ENSMUST00000118168 334 ntBASIC16.12■□□□□ 0.17
Sim1Q61045 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.12■□□□□ 0.17
Sim1Q61045 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.12■□□□□ 0.17
Sim1Q61045 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms