Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.69■□□□□ 0.26
Slc6a4Q60857 Gm5864-201ENSMUST00000202263 970 ntBASIC16.69■□□□□ 0.26
Slc6a4Q60857 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.69■□□□□ 0.26
Slc6a4Q60857 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.69■□□□□ 0.26
Slc6a4Q60857 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a4Q60857 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.68■□□□□ 0.26
Slc6a4Q60857 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.68■□□□□ 0.26
Slc6a4Q60857 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.68■□□□□ 0.26
Slc6a4Q60857 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Slc6a4Q60857 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.67■□□□□ 0.26
Slc6a4Q60857 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a4Q60857 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Slc6a4Q60857 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Slc6a4Q60857 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
Slc6a4Q60857 Gm13216-201ENSMUST00000117145 591 ntBASIC16.67■□□□□ 0.26
Slc6a4Q60857 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.67■□□□□ 0.26
Slc6a4Q60857 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.67■□□□□ 0.26
Slc6a4Q60857 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a4Q60857 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.67■□□□□ 0.26
Slc6a4Q60857 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a4Q60857 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a4Q60857 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a4Q60857 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Slc6a4Q60857 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a4Q60857 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a4Q60857 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.66■□□□□ 0.26
Slc6a4Q60857 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a4Q60857 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Gm13884-201ENSMUST00000118103 829 ntBASIC16.65■□□□□ 0.26
Slc6a4Q60857 Gm11452-201ENSMUST00000122376 690 ntBASIC16.65■□□□□ 0.26
Slc6a4Q60857 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.65■□□□□ 0.26
Slc6a4Q60857 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms