Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfaip3Q60769 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Tnfaip3Q60769 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.34■□□□□ 0.05
Tnfaip3Q60769 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfaip3Q60769 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.34■□□□□ 0.05
Tnfaip3Q60769 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfaip3Q60769 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfaip3Q60769 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfaip3Q60769 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.34■□□□□ 0.05
Tnfaip3Q60769 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Tnfaip3Q60769 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tnfaip3Q60769 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfaip3Q60769 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Tnfaip3Q60769 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tnfaip3Q60769 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tnfaip3Q60769 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Tnfaip3Q60769 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfaip3Q60769 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.32■□□□□ 0.04
Tnfaip3Q60769 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfaip3Q60769 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfaip3Q60769 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms