Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-4Q5R1I0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Gm27741-201ENSMUST00000185060 237 ntBASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav6d-4Q5R1I0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Gm36967-201ENSMUST00000193814 266 ntBASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-4Q5R1I0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-4Q5R1I0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Gm7153-201ENSMUST00000117092 455 ntBASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.67□□□□□ -0.22
Trav6d-4Q5R1I0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms