Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim80Q3V061 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim80Q3V061 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim80Q3V061 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim80Q3V061 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim80Q3V061 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim80Q3V061 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.91■□□□□ 0.3
Trim80Q3V061 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Trim80Q3V061 Mir2861-201ENSMUST00000175539 82 ntBASIC16.91■□□□□ 0.3
Trim80Q3V061 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.91■□□□□ 0.3
Trim80Q3V061 Gm30025-201ENSMUST00000218555 728 ntBASIC16.91■□□□□ 0.3
Trim80Q3V061 Odf3b-204ENSMUST00000227834 930 ntBASIC16.91■□□□□ 0.3
Trim80Q3V061 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim80Q3V061 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim80Q3V061 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.91■□□□□ 0.3
Trim80Q3V061 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim80Q3V061 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim80Q3V061 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim80Q3V061 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.9■□□□□ 0.3
Trim80Q3V061 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim80Q3V061 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim80Q3V061 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.9■□□□□ 0.3
Trim80Q3V061 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim80Q3V061 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim80Q3V061 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim80Q3V061 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim80Q3V061 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim80Q3V061 Gm43183-201ENSMUST00000200632 547 ntBASIC16.89■□□□□ 0.29
Trim80Q3V061 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trim80Q3V061 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim80Q3V061 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim80Q3V061 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Trim80Q3V061 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Trim80Q3V061 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Trim80Q3V061 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim80Q3V061 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim80Q3V061 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.88■□□□□ 0.29
Trim80Q3V061 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Trim80Q3V061 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim80Q3V061 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim80Q3V061 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Trim80Q3V061 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Gm15375-201ENSMUST00000119510 849 ntBASIC16.87■□□□□ 0.29
Trim80Q3V061 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms