Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Gm9013-201ENSMUST00000132939 882 ntBASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkl5Q3UTQ8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cdkl5Q3UTQ8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cdkl5Q3UTQ8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkl5Q3UTQ8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms