Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf180Q3U827 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf180Q3U827 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf180Q3U827 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf180Q3U827 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rnf180Q3U827 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf180Q3U827 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Ighv5-13-201ENSMUST00000193550 290 ntBASIC19.15■□□□□ 0.66
Rnf180Q3U827 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC19.15■□□□□ 0.66
Rnf180Q3U827 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf180Q3U827 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.14■□□□□ 0.66
Rnf180Q3U827 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.14■□□□□ 0.65
Rnf180Q3U827 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf180Q3U827 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rnf180Q3U827 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf180Q3U827 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Gm15358-201ENSMUST00000119249 520 ntBASIC19.13■□□□□ 0.65
Rnf180Q3U827 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Gm45384-201ENSMUST00000210451 277 ntBASIC19.13■□□□□ 0.65
Rnf180Q3U827 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rnf180Q3U827 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rnf180Q3U827 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf180Q3U827 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf180Q3U827 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf180Q3U827 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf180Q3U827 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rnf180Q3U827 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rnf180Q3U827 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC19.12■□□□□ 0.65
Rnf180Q3U827 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Rnf180Q3U827 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.12■□□□□ 0.65
Rnf180Q3U827 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf180Q3U827 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.12■□□□□ 0.65
Rnf180Q3U827 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf180Q3U827 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf180Q3U827 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf180Q3U827 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.12■□□□□ 0.65
Rnf180Q3U827 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.11■□□□□ 0.65
Rnf180Q3U827 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.11■□□□□ 0.65
Rnf180Q3U827 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Gm13829-201ENSMUST00000119600 138 ntBASIC19.11■□□□□ 0.65
Rnf180Q3U827 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.11■□□□□ 0.65
Rnf180Q3U827 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC19.11■□□□□ 0.65
Rnf180Q3U827 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf180Q3U827 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rnf180Q3U827 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms