Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.03■□□□□ -0
Cacna1aP97445 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cacna1aP97445 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cacna1aP97445 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.03■□□□□ -0
Cacna1aP97445 Gm11424-201ENSMUST00000121929 829 ntBASIC15.03■□□□□ -0
Cacna1aP97445 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.03■□□□□ -0
Cacna1aP97445 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.03■□□□□ -0
Cacna1aP97445 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.03■□□□□ -0
Cacna1aP97445 Gm6089-201ENSMUST00000197666 938 ntBASIC15.03■□□□□ -0
Cacna1aP97445 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.03■□□□□ -0
Cacna1aP97445 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cacna1aP97445 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.03■□□□□ -0
Cacna1aP97445 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cacna1aP97445 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Gm11025-201ENSMUST00000140773 466 ntBASIC15.03■□□□□ -0
Cacna1aP97445 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1aP97445 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacna1aP97445 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1aP97445 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Cacna1aP97445 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.02■□□□□ -0
Cacna1aP97445 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.02■□□□□ -0
Cacna1aP97445 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.02■□□□□ -0
Cacna1aP97445 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cacna1aP97445 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.02■□□□□ -0
Cacna1aP97445 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cacna1aP97445 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1aP97445 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.02■□□□□ -0
Cacna1aP97445 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1aP97445 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cacna1aP97445 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1aP97445 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacna1aP97445 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1aP97445 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1aP97445 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1aP97445 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1aP97445 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1aP97445 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1aP97445 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1aP97445 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.02□□□□□ -0.01
Cacna1aP97445 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1aP97445 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1aP97445 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1aP97445 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1aP97445 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1aP97445 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1aP97445 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1aP97445 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1aP97445 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.01□□□□□ -0.01
Cacna1aP97445 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1aP97445 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.01□□□□□ -0.01
Cacna1aP97445 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1aP97445 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1aP97445 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1aP97445 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1aP97445 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1aP97445 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1aP97445 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1aP97445 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.01□□□□□ -0.01
Cacna1aP97445 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cacna1aP97445 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.01□□□□□ -0.01
Cacna1aP97445 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1aP97445 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15□□□□□ -0.01
Cacna1aP97445 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1aP97445 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1aP97445 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15□□□□□ -0.01
Cacna1aP97445 AC139382.1-201ENSMUST00000221402 498 ntBASIC15□□□□□ -0.01
Cacna1aP97445 Gm5828-201ENSMUST00000071842 1860 ntBASIC15□□□□□ -0.01
Cacna1aP97445 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cacna1aP97445 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1aP97445 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1aP97445 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1aP97445 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cacna1aP97445 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1aP97445 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1aP97445 Gm4459-201ENSMUST00000118750 468 ntBASIC15□□□□□ -0.01
Cacna1aP97445 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1aP97445 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15□□□□□ -0.01
Cacna1aP97445 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1aP97445 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15□□□□□ -0.01
Cacna1aP97445 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Cacna1aP97445 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1aP97445 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1aP97445 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms