Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps33bP59016 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vps33bP59016 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Vps33bP59016 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.56■□□□□ 0.88
Vps33bP59016 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vps33bP59016 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Vps33bP59016 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC20.56■□□□□ 0.88
Vps33bP59016 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.56■□□□□ 0.88
Vps33bP59016 Gm13365-201ENSMUST00000121188 973 ntBASIC20.56■□□□□ 0.88
Vps33bP59016 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Vps33bP59016 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps33bP59016 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps33bP59016 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Vps33bP59016 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Vps33bP59016 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps33bP59016 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps33bP59016 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps33bP59016 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps33bP59016 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps33bP59016 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps33bP59016 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Vps33bP59016 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps33bP59016 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps33bP59016 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.55■□□□□ 0.88
Vps33bP59016 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vps33bP59016 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vps33bP59016 Gm44335-201ENSMUST00000196879 141 ntBASIC20.55■□□□□ 0.88
Vps33bP59016 Gm44297-201ENSMUST00000198304 141 ntBASIC20.55■□□□□ 0.88
Vps33bP59016 Gm44346-201ENSMUST00000198851 141 ntBASIC20.55■□□□□ 0.88
Vps33bP59016 Gm45747-201ENSMUST00000212203 999 ntBASIC20.55■□□□□ 0.88
Vps33bP59016 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.55■□□□□ 0.88
Vps33bP59016 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC20.55■□□□□ 0.88
Vps33bP59016 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps33bP59016 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vps33bP59016 Gm13332-201ENSMUST00000120451 1398 ntBASIC20.55■□□□□ 0.88
Vps33bP59016 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vps33bP59016 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps33bP59016 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps33bP59016 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.54■□□□□ 0.88
Vps33bP59016 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps33bP59016 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.54■□□□□ 0.88
Vps33bP59016 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps33bP59016 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.54■□□□□ 0.88
Vps33bP59016 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC20.54■□□□□ 0.88
Vps33bP59016 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps33bP59016 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.54■□□□□ 0.88
Vps33bP59016 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps33bP59016 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps33bP59016 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps33bP59016 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps33bP59016 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.53■□□□□ 0.88
Vps33bP59016 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.53■□□□□ 0.88
Vps33bP59016 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Vps33bP59016 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps33bP59016 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps33bP59016 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC20.53■□□□□ 0.88
Vps33bP59016 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps33bP59016 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Vps33bP59016 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps33bP59016 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Vps33bP59016 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps33bP59016 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps33bP59016 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
Vps33bP59016 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC20.52■□□□□ 0.88
Vps33bP59016 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC20.52■□□□□ 0.88
Vps33bP59016 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.52■□□□□ 0.88
Vps33bP59016 Gm5177-201ENSMUST00000183092 997 ntBASIC20.52■□□□□ 0.88
Vps33bP59016 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.52■□□□□ 0.88
Vps33bP59016 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Vps33bP59016 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Vps33bP59016 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps33bP59016 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.52■□□□□ 0.88
Vps33bP59016 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vps33bP59016 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Vps33bP59016 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps33bP59016 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Vps33bP59016 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps33bP59016 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps33bP59016 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps33bP59016 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Vps33bP59016 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps33bP59016 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps33bP59016 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps33bP59016 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps33bP59016 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps33bP59016 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps33bP59016 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms