Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LtbrP50284 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LtbrP50284 Gm27628-201ENSMUST00000184911 107 ntBASIC19.13■□□□□ 0.65
LtbrP50284 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LtbrP50284 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LtbrP50284 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LtbrP50284 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.13■□□□□ 0.65
LtbrP50284 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LtbrP50284 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LtbrP50284 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.13■□□□□ 0.65
LtbrP50284 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LtbrP50284 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LtbrP50284 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LtbrP50284 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LtbrP50284 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LtbrP50284 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LtbrP50284 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LtbrP50284 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.12■□□□□ 0.65
LtbrP50284 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LtbrP50284 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LtbrP50284 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LtbrP50284 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LtbrP50284 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LtbrP50284 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.12■□□□□ 0.65
LtbrP50284 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
LtbrP50284 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LtbrP50284 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.11■□□□□ 0.65
LtbrP50284 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.11■□□□□ 0.65
LtbrP50284 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.11■□□□□ 0.65
LtbrP50284 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.11■□□□□ 0.65
LtbrP50284 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
LtbrP50284 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LtbrP50284 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.11■□□□□ 0.65
LtbrP50284 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LtbrP50284 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LtbrP50284 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LtbrP50284 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LtbrP50284 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LtbrP50284 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
LtbrP50284 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.1■□□□□ 0.65
LtbrP50284 Gm25745-201ENSMUST00000174945 133 ntBASIC19.1■□□□□ 0.65
LtbrP50284 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LtbrP50284 Gm6550-201ENSMUST00000187574 993 ntBASIC19.1■□□□□ 0.65
LtbrP50284 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.1■□□□□ 0.65
LtbrP50284 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LtbrP50284 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LtbrP50284 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LtbrP50284 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LtbrP50284 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LtbrP50284 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LtbrP50284 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
LtbrP50284 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LtbrP50284 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LtbrP50284 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LtbrP50284 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LtbrP50284 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.09■□□□□ 0.65
LtbrP50284 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.09■□□□□ 0.65
LtbrP50284 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
LtbrP50284 Gm13036-201ENSMUST00000117799 748 ntBASIC19.09■□□□□ 0.65
LtbrP50284 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.09■□□□□ 0.65
LtbrP50284 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LtbrP50284 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.09■□□□□ 0.65
LtbrP50284 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LtbrP50284 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LtbrP50284 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LtbrP50284 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LtbrP50284 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LtbrP50284 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LtbrP50284 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LtbrP50284 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LtbrP50284 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LtbrP50284 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
LtbrP50284 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LtbrP50284 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
LtbrP50284 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LtbrP50284 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LtbrP50284 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms