Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GdnfP48540 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
GdnfP48540 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
GdnfP48540 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GdnfP48540 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GdnfP48540 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.32□□□□□ -0.12
GdnfP48540 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GdnfP48540 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GdnfP48540 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
GdnfP48540 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
GdnfP48540 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
GdnfP48540 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
GdnfP48540 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GdnfP48540 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GdnfP48540 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GdnfP48540 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GdnfP48540 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.31□□□□□ -0.12
GdnfP48540 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GdnfP48540 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
GdnfP48540 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.31□□□□□ -0.12
GdnfP48540 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.31□□□□□ -0.12
GdnfP48540 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GdnfP48540 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
GdnfP48540 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GdnfP48540 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.3□□□□□ -0.12
GdnfP48540 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.3□□□□□ -0.12
GdnfP48540 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
GdnfP48540 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.3□□□□□ -0.12
GdnfP48540 Mir5122-201ENSMUST00000175004 89 ntBASIC14.3□□□□□ -0.12
GdnfP48540 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.3□□□□□ -0.12
GdnfP48540 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GdnfP48540 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.3□□□□□ -0.12
GdnfP48540 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
GdnfP48540 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GdnfP48540 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
GdnfP48540 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
GdnfP48540 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GdnfP48540 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GdnfP48540 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GdnfP48540 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GdnfP48540 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms