Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps4bP46467 Gm5417-201ENSMUST00000079706 384 ntBASIC16.58■□□□□ 0.24
Vps4bP46467 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps4bP46467 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps4bP46467 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps4bP46467 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps4bP46467 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps4bP46467 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Vps4bP46467 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Vps4bP46467 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps4bP46467 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps4bP46467 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps4bP46467 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps4bP46467 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vps4bP46467 Gm10231-201ENSMUST00000181584 441 ntBASIC16.57■□□□□ 0.24
Vps4bP46467 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Gm21362-201ENSMUST00000194272 928 ntBASIC16.57■□□□□ 0.24
Vps4bP46467 Gm10175-202ENSMUST00000208752 441 ntBASIC16.57■□□□□ 0.24
Vps4bP46467 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps4bP46467 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps4bP46467 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps4bP46467 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.56■□□□□ 0.24
Vps4bP46467 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps4bP46467 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vps4bP46467 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Gm30025-201ENSMUST00000218555 728 ntBASIC16.56■□□□□ 0.24
Vps4bP46467 Gm7370-201ENSMUST00000219471 767 ntBASIC16.56■□□□□ 0.24
Vps4bP46467 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.56■□□□□ 0.24
Vps4bP46467 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.56■□□□□ 0.24
Vps4bP46467 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vps4bP46467 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.56■□□□□ 0.24
Vps4bP46467 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps4bP46467 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps4bP46467 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Vps4bP46467 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Vps4bP46467 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vps4bP46467 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.55■□□□□ 0.24
Vps4bP46467 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Vps4bP46467 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Vps4bP46467 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.55■□□□□ 0.24
Vps4bP46467 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps4bP46467 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps4bP46467 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms