Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.54□□□□□ -0.24
Abca1P41233 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Abca1P41233 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Abca1P41233 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.54□□□□□ -0.24
Abca1P41233 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Abca1P41233 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Abca1P41233 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Abca1P41233 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.54□□□□□ -0.24
Abca1P41233 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Abca1P41233 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Abca1P41233 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Abca1P41233 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Abca1P41233 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Gm27000-201ENSMUST00000182943 842 ntBASIC13.53□□□□□ -0.24
Abca1P41233 Gm5264-201ENSMUST00000190584 848 ntBASIC13.53□□□□□ -0.24
Abca1P41233 Gm18421-201ENSMUST00000204122 625 ntBASIC13.53□□□□□ -0.24
Abca1P41233 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.53□□□□□ -0.24
Abca1P41233 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Gm5364-201ENSMUST00000216789 889 ntBASIC13.53□□□□□ -0.24
Abca1P41233 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.53□□□□□ -0.24
Abca1P41233 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abca1P41233 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abca1P41233 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abca1P41233 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abca1P41233 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.52□□□□□ -0.24
Abca1P41233 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abca1P41233 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.52□□□□□ -0.24
Abca1P41233 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abca1P41233 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abca1P41233 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abca1P41233 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abca1P41233 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abca1P41233 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abca1P41233 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.52□□□□□ -0.25
Abca1P41233 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abca1P41233 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abca1P41233 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abca1P41233 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abca1P41233 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abca1P41233 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abca1P41233 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.52□□□□□ -0.25
Abca1P41233 Gm11594-201ENSMUST00000122313 162 ntBASIC13.52□□□□□ -0.25
Abca1P41233 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abca1P41233 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.52□□□□□ -0.25
Abca1P41233 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.52□□□□□ -0.25
Abca1P41233 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Abca1P41233 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Abca1P41233 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abca1P41233 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abca1P41233 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.52□□□□□ -0.25
Abca1P41233 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Abca1P41233 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abca1P41233 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abca1P41233 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.51□□□□□ -0.25
Abca1P41233 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Abca1P41233 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Gm13186-201ENSMUST00000118031 316 ntBASIC13.51□□□□□ -0.25
Abca1P41233 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.51□□□□□ -0.25
Abca1P41233 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.51□□□□□ -0.25
Abca1P41233 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Abca1P41233 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.51□□□□□ -0.25
Abca1P41233 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.51□□□□□ -0.25
Abca1P41233 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms