Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk2P38575 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk2P38575 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk2P38575 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk2P38575 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Upk2P38575 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk2P38575 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.34□□□□□ -0.11
Upk2P38575 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Gm10013-201ENSMUST00000106074 672 ntBASIC14.34□□□□□ -0.11
Upk2P38575 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.34□□□□□ -0.11
Upk2P38575 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Upk2P38575 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.34□□□□□ -0.11
Upk2P38575 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Upk2P38575 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.34□□□□□ -0.11
Upk2P38575 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk2P38575 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Upk2P38575 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Upk2P38575 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Upk2P38575 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Upk2P38575 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Upk2P38575 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Upk2P38575 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.33□□□□□ -0.12
Upk2P38575 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Upk2P38575 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Upk2P38575 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Upk2P38575 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.33□□□□□ -0.12
Upk2P38575 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Upk2P38575 Gm10231-201ENSMUST00000181584 441 ntBASIC14.33□□□□□ -0.12
Upk2P38575 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Upk2P38575 Gm10175-202ENSMUST00000208752 441 ntBASIC14.33□□□□□ -0.12
Upk2P38575 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.33□□□□□ -0.12
Upk2P38575 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Upk2P38575 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.33□□□□□ -0.12
Upk2P38575 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.33□□□□□ -0.12
Upk2P38575 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk2P38575 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.32□□□□□ -0.12
Upk2P38575 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Upk2P38575 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Upk2P38575 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.32□□□□□ -0.12
Upk2P38575 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.32□□□□□ -0.12
Upk2P38575 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.32□□□□□ -0.12
Upk2P38575 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Upk2P38575 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.32□□□□□ -0.12
Upk2P38575 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Upk2P38575 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk2P38575 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Upk2P38575 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk2P38575 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms