Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.23■□□□□ 0.19
Nckap1P28660 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Nckap1P28660 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nckap1P28660 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Nckap1P28660 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Nckap1P28660 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Nckap1P28660 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.22■□□□□ 0.19
Nckap1P28660 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.22■□□□□ 0.19
Nckap1P28660 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Nckap1P28660 Gm6376-201ENSMUST00000209407 580 ntBASIC16.22■□□□□ 0.19
Nckap1P28660 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Nckap1P28660 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.22■□□□□ 0.19
Nckap1P28660 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nckap1P28660 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nckap1P28660 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.21■□□□□ 0.19
Nckap1P28660 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nckap1P28660 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Nckap1P28660 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.21■□□□□ 0.19
Nckap1P28660 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.21■□□□□ 0.19
Nckap1P28660 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.21■□□□□ 0.19
Nckap1P28660 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.21■□□□□ 0.19
Nckap1P28660 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nckap1P28660 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nckap1P28660 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nckap1P28660 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.21■□□□□ 0.18
Nckap1P28660 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Nckap1P28660 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nckap1P28660 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nckap1P28660 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nckap1P28660 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nckap1P28660 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.2■□□□□ 0.18
Nckap1P28660 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.2■□□□□ 0.18
Nckap1P28660 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.2■□□□□ 0.18
Nckap1P28660 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.2■□□□□ 0.18
Nckap1P28660 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Nckap1P28660 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Nckap1P28660 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Nckap1P28660 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nckap1P28660 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nckap1P28660 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.19■□□□□ 0.18
Nckap1P28660 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.19■□□□□ 0.18
Nckap1P28660 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms