Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.09■□□□□ 0.49
Hoxc6P10629 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc6P10629 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc6P10629 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Hoxc6P10629 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Hoxc6P10629 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc6P10629 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc6P10629 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc6P10629 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc6P10629 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc6P10629 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.09■□□□□ 0.49
Hoxc6P10629 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc6P10629 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Hoxc6P10629 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hoxc6P10629 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxc6P10629 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.08■□□□□ 0.49
Hoxc6P10629 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxc6P10629 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hoxc6P10629 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxc6P10629 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Hoxc6P10629 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxc6P10629 Gm10175-201ENSMUST00000086013 645 ntBASIC18.08■□□□□ 0.48
Hoxc6P10629 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxc6P10629 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxc6P10629 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxc6P10629 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxc6P10629 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxc6P10629 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxc6P10629 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Hoxc6P10629 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Hoxc6P10629 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxc6P10629 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Hoxc6P10629 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hoxc6P10629 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Hoxc6P10629 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.07■□□□□ 0.48
Hoxc6P10629 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.07■□□□□ 0.48
Hoxc6P10629 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Hoxc6P10629 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hoxc6P10629 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.06■□□□□ 0.48
Hoxc6P10629 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Gm14822-201ENSMUST00000122247 291 ntBASIC18.06■□□□□ 0.48
Hoxc6P10629 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.06■□□□□ 0.48
Hoxc6P10629 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.06■□□□□ 0.48
Hoxc6P10629 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.06■□□□□ 0.48
Hoxc6P10629 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.06■□□□□ 0.48
Hoxc6P10629 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hoxc6P10629 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Hoxc6P10629 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Hoxc6P10629 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Hoxc6P10629 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Hoxc6P10629 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Gm25911-201ENSMUST00000157621 56 ntBASIC18.05■□□□□ 0.48
Hoxc6P10629 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hoxc6P10629 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hoxc6P10629 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.05■□□□□ 0.48
Hoxc6P10629 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms