Protein–RNA interactions for Protein: P09632

Hoxb8, Homeobox protein Hox-B8, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb8P09632 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxb8P09632 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hoxb8P09632 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.36■□□□□ 0.37
Hoxb8P09632 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.36■□□□□ 0.37
Hoxb8P09632 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.36■□□□□ 0.37
Hoxb8P09632 Gm29707-201ENSMUST00000196325 491 ntBASIC17.36■□□□□ 0.37
Hoxb8P09632 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hoxb8P09632 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Hoxb8P09632 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hoxb8P09632 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxb8P09632 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Hoxb8P09632 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hoxb8P09632 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.35■□□□□ 0.37
Hoxb8P09632 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.35■□□□□ 0.37
Hoxb8P09632 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hoxb8P09632 Gm6376-201ENSMUST00000209407 580 ntBASIC17.35■□□□□ 0.37
Hoxb8P09632 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hoxb8P09632 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.35■□□□□ 0.37
Hoxb8P09632 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hoxb8P09632 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.35■□□□□ 0.37
Hoxb8P09632 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Hoxb8P09632 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb8P09632 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb8P09632 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb8P09632 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb8P09632 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Hoxb8P09632 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb8P09632 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.34■□□□□ 0.37
Hoxb8P09632 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.34■□□□□ 0.37
Hoxb8P09632 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb8P09632 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb8P09632 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb8P09632 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb8P09632 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hoxb8P09632 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb8P09632 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb8P09632 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb8P09632 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb8P09632 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxb8P09632 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxb8P09632 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxb8P09632 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxb8P09632 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxb8P09632 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxb8P09632 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxb8P09632 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Hoxb8P09632 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb8P09632 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb8P09632 Gm7862-201ENSMUST00000121461 292 ntBASIC17.33■□□□□ 0.36
Hoxb8P09632 Gm1401-201ENSMUST00000122048 772 ntBASIC17.33■□□□□ 0.36
Hoxb8P09632 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.33■□□□□ 0.36
Hoxb8P09632 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.33■□□□□ 0.36
Hoxb8P09632 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.33■□□□□ 0.36
Hoxb8P09632 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.33■□□□□ 0.36
Hoxb8P09632 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Hoxb8P09632 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb8P09632 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb8P09632 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb8P09632 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hoxb8P09632 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Hoxb8P09632 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb8P09632 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb8P09632 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Hoxb8P09632 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb8P09632 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb8P09632 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb8P09632 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb8P09632 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb8P09632 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb8P09632 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb8P09632 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb8P09632 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms