Protein–RNA interactions for Protein: P09055

Itgb1, Integrin beta-1, mousemouse

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb1P09055 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.05■□□□□ 0.32
Itgb1P09055 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.05■□□□□ 0.32
Itgb1P09055 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.05■□□□□ 0.32
Itgb1P09055 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.05■□□□□ 0.32
Itgb1P09055 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.05■□□□□ 0.32
Itgb1P09055 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Gm10355-201ENSMUST00000097146 517 ntBASIC17.05■□□□□ 0.32
Itgb1P09055 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Itgb1P09055 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb1P09055 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.04■□□□□ 0.32
Itgb1P09055 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Itgb1P09055 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.04■□□□□ 0.32
Itgb1P09055 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.04■□□□□ 0.32
Itgb1P09055 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.04■□□□□ 0.32
Itgb1P09055 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Gm36967-201ENSMUST00000193814 266 ntBASIC17.04■□□□□ 0.32
Itgb1P09055 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.04■□□□□ 0.32
Itgb1P09055 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb1P09055 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.03■□□□□ 0.32
Itgb1P09055 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Itgb1P09055 Gm15173-201ENSMUST00000122049 433 ntBASIC17.03■□□□□ 0.32
Itgb1P09055 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Itgb1P09055 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.03■□□□□ 0.32
Itgb1P09055 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Itgb1P09055 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Itgb1P09055 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Itgb1P09055 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Itgb1P09055 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Itgb1P09055 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.02■□□□□ 0.32
Itgb1P09055 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Itgb1P09055 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Gm4459-201ENSMUST00000118750 468 ntBASIC17.02■□□□□ 0.32
Itgb1P09055 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.02■□□□□ 0.32
Itgb1P09055 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.02■□□□□ 0.32
Itgb1P09055 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.02■□□□□ 0.32
Itgb1P09055 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.02■□□□□ 0.32
Itgb1P09055 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.02■□□□□ 0.32
Itgb1P09055 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Itgb1P09055 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Itgb1P09055 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Itgb1P09055 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Itgb1P09055 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Itgb1P09055 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Itgb1P09055 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Itgb1P09055 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms