Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm43575-201ENSMUST00000196420 516 ntBASIC15.3■□□□□ 0.04
Sod1P08228 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sod1P08228 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sod1P08228 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sod1P08228 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sod1P08228 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sod1P08228 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sod1P08228 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sod1P08228 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sod1P08228 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.29■□□□□ 0.04
Sod1P08228 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sod1P08228 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm6736-201ENSMUST00000166583 948 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm8825-201ENSMUST00000182565 998 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm4518-201ENSMUST00000182638 718 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm2756-201ENSMUST00000195851 400 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.29■□□□□ 0.04
Sod1P08228 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.29■□□□□ 0.04
Sod1P08228 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.29■□□□□ 0.04
Sod1P08228 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.29■□□□□ 0.04
Sod1P08228 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Sod1P08228 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sod1P08228 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sod1P08228 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sod1P08228 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sod1P08228 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.28■□□□□ 0.04
Sod1P08228 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sod1P08228 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.28■□□□□ 0.04
Sod1P08228 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.28■□□□□ 0.04
Sod1P08228 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.28■□□□□ 0.04
Sod1P08228 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sod1P08228 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sod1P08228 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sod1P08228 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sod1P08228 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.28■□□□□ 0.04
Sod1P08228 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sod1P08228 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sod1P08228 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sod1P08228 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Sod1P08228 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sod1P08228 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sod1P08228 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sod1P08228 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sod1P08228 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sod1P08228 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sod1P08228 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.27■□□□□ 0.04
Sod1P08228 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sod1P08228 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sod1P08228 Gm23935-201ENSMUST00000102303 57 ntBASIC15.27■□□□□ 0.04
Sod1P08228 Gm24270-201ENSMUST00000102326 57 ntBASIC15.27■□□□□ 0.04
Sod1P08228 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Sod1P08228 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.27■□□□□ 0.04
Sod1P08228 Gm24245-201ENSMUST00000157318 57 ntBASIC15.27■□□□□ 0.04
Sod1P08228 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.27■□□□□ 0.04
Sod1P08228 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.27■□□□□ 0.04
Sod1P08228 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sod1P08228 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sod1P08228 Gm10175-201ENSMUST00000086013 645 ntBASIC15.27■□□□□ 0.04
Sod1P08228 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sod1P08228 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sod1P08228 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sod1P08228 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sod1P08228 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sod1P08228 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sod1P08228 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sod1P08228 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sod1P08228 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sod1P08228 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sod1P08228 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sod1P08228 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sod1P08228 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sod1P08228 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sod1P08228 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms