Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.38□□□□□ -0.11
P04224 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
P04224 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.38□□□□□ -0.11
P04224 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.38□□□□□ -0.11
P04224 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
P04224 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.38□□□□□ -0.11
P04224 Gm5408-201ENSMUST00000197998 747 ntBASIC14.38□□□□□ -0.11
P04224 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
P04224 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
P04224 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P04224 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.37□□□□□ -0.11
P04224 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
P04224 Gm11643-201ENSMUST00000119578 864 ntBASIC14.37□□□□□ -0.11
P04224 Gm4968-201ENSMUST00000071458 858 ntBASIC14.37□□□□□ -0.11
P04224 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
P04224 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.37□□□□□ -0.11
P04224 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.37□□□□□ -0.11
P04224 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
P04224 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
P04224 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Mir6349-201ENSMUST00000184059 97 ntBASIC14.36□□□□□ -0.11
P04224 Gm2559-201ENSMUST00000201323 363 ntBASIC14.36□□□□□ -0.11
P04224 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
P04224 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
P04224 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.36□□□□□ -0.11
P04224 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
P04224 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
P04224 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.36□□□□□ -0.11
P04224 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.36□□□□□ -0.11
P04224 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P04224 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.35□□□□□ -0.11
P04224 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
P04224 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.35□□□□□ -0.11
P04224 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.35□□□□□ -0.11
P04224 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.35□□□□□ -0.11
P04224 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
P04224 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Gm27405-201ENSMUST00000184201 112 ntBASIC14.35□□□□□ -0.11
P04224 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.35□□□□□ -0.11
P04224 Gm10138-203ENSMUST00000206952 366 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms