Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IghmP01872 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
IghmP01872 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IghmP01872 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.31■□□□□ 0.04
IghmP01872 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
IghmP01872 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
IghmP01872 Gm26039-201ENSMUST00000158152 144 ntBASIC15.31■□□□□ 0.04
IghmP01872 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.31■□□□□ 0.04
IghmP01872 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
IghmP01872 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.31■□□□□ 0.04
IghmP01872 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
IghmP01872 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IghmP01872 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
IghmP01872 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
IghmP01872 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IghmP01872 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
IghmP01872 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IghmP01872 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.31■□□□□ 0.04
IghmP01872 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IghmP01872 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IghmP01872 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IghmP01872 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.31■□□□□ 0.04
IghmP01872 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
IghmP01872 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
IghmP01872 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.3■□□□□ 0.04
IghmP01872 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.3■□□□□ 0.04
IghmP01872 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.3■□□□□ 0.04
IghmP01872 Mir5130-201ENSMUST00000175160 84 ntBASIC15.3■□□□□ 0.04
IghmP01872 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
IghmP01872 Gm7889-201ENSMUST00000185591 958 ntBASIC15.3■□□□□ 0.04
IghmP01872 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.3■□□□□ 0.04
IghmP01872 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.3■□□□□ 0.04
IghmP01872 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
IghmP01872 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IghmP01872 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.29■□□□□ 0.04
IghmP01872 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.29■□□□□ 0.04
IghmP01872 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.29■□□□□ 0.04
IghmP01872 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Gm45058-201ENSMUST00000205810 766 ntBASIC15.29■□□□□ 0.04
IghmP01872 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.29■□□□□ 0.04
IghmP01872 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.29■□□□□ 0.04
IghmP01872 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IghmP01872 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IghmP01872 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
IghmP01872 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.28■□□□□ 0.04
IghmP01872 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IghmP01872 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IghmP01872 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.28■□□□□ 0.04
IghmP01872 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IghmP01872 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.28■□□□□ 0.04
IghmP01872 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.28■□□□□ 0.04
IghmP01872 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IghmP01872 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IghmP01872 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
IghmP01872 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IghmP01872 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IghmP01872 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IghmP01872 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
IghmP01872 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IghmP01872 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
IghmP01872 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IghmP01872 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
IghmP01872 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
IghmP01872 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms