Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Sh2d1aO88890 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh2d1aO88890 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh2d1aO88890 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh2d1aO88890 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh2d1aO88890 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.59□□□□□ -0.55
Sh2d1aO88890 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sh2d1aO88890 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh2d1aO88890 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh2d1aO88890 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh2d1aO88890 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.59□□□□□ -0.55
Sh2d1aO88890 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.59□□□□□ -0.55
Sh2d1aO88890 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh2d1aO88890 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sh2d1aO88890 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sh2d1aO88890 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.58□□□□□ -0.56
Sh2d1aO88890 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.58□□□□□ -0.56
Sh2d1aO88890 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.58□□□□□ -0.56
Sh2d1aO88890 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh2d1aO88890 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sh2d1aO88890 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.56□□□□□ -0.56
Sh2d1aO88890 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.56□□□□□ -0.56
Sh2d1aO88890 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sh2d1aO88890 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh2d1aO88890 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh2d1aO88890 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh2d1aO88890 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh2d1aO88890 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh2d1aO88890 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh2d1aO88890 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh2d1aO88890 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms