Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capns1O88456 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Capns1O88456 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capns1O88456 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Capns1O88456 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Capns1O88456 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Capns1O88456 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Capns1O88456 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Gm6659-201ENSMUST00000174752 547 ntBASIC15.13■□□□□ 0.01
Capns1O88456 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Capns1O88456 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.13■□□□□ 0.01
Capns1O88456 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.13■□□□□ 0.01
Capns1O88456 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Capns1O88456 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.13■□□□□ 0.01
Capns1O88456 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Capns1O88456 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Capns1O88456 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.13■□□□□ 0.01
Capns1O88456 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Capns1O88456 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Capns1O88456 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.12■□□□□ 0.01
Capns1O88456 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Capns1O88456 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Capns1O88456 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Capns1O88456 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Capns1O88456 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.11■□□□□ 0.01
Capns1O88456 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Capns1O88456 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.11■□□□□ 0.01
Capns1O88456 Gm7367-201ENSMUST00000057611 492 ntBASIC15.11■□□□□ 0.01
Capns1O88456 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Capns1O88456 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Capns1O88456 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Capns1O88456 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Capns1O88456 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Capns1O88456 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.1■□□□□ 0.01
Capns1O88456 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Capns1O88456 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms