Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tulp3O88413 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tulp3O88413 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tulp3O88413 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tulp3O88413 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tulp3O88413 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tulp3O88413 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Tulp3O88413 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tulp3O88413 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tulp3O88413 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tulp3O88413 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tulp3O88413 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tulp3O88413 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.27■□□□□ 0.03
Tulp3O88413 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tulp3O88413 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tulp3O88413 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tulp3O88413 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tulp3O88413 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tulp3O88413 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tulp3O88413 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Gm12085-201ENSMUST00000119263 940 ntBASIC15.26■□□□□ 0.03
Tulp3O88413 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.26■□□□□ 0.03
Tulp3O88413 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.26■□□□□ 0.03
Tulp3O88413 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.26■□□□□ 0.03
Tulp3O88413 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tulp3O88413 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tulp3O88413 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.25■□□□□ 0.03
Tulp3O88413 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.25■□□□□ 0.03
Tulp3O88413 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Tulp3O88413 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Tulp3O88413 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.25■□□□□ 0.03
Tulp3O88413 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tulp3O88413 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tulp3O88413 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.25■□□□□ 0.03
Tulp3O88413 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Tulp3O88413 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tulp3O88413 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Tulp3O88413 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tulp3O88413 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.24■□□□□ 0.03
Tulp3O88413 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.24■□□□□ 0.03
Tulp3O88413 Gm15378-201ENSMUST00000121894 207 ntBASIC15.24■□□□□ 0.03
Tulp3O88413 Gm38027-201ENSMUST00000192315 235 ntBASIC15.24■□□□□ 0.03
Tulp3O88413 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Tulp3O88413 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.24■□□□□ 0.03
Tulp3O88413 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.24■□□□□ 0.03
Tulp3O88413 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tulp3O88413 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tulp3O88413 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tulp3O88413 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.23■□□□□ 0.03
Tulp3O88413 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.23■□□□□ 0.03
Tulp3O88413 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms