Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx3O70137 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx3O70137 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx3O70137 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx3O70137 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx3O70137 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx3O70137 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.85□□□□□ -0.03
Alx3O70137 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx3O70137 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx3O70137 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx3O70137 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Alx3O70137 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Alx3O70137 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.84□□□□□ -0.03
Alx3O70137 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Alx3O70137 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.84□□□□□ -0.03
Alx3O70137 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.84□□□□□ -0.03
Alx3O70137 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Alx3O70137 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Alx3O70137 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Alx3O70137 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.84□□□□□ -0.03
Alx3O70137 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx3O70137 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Alx3O70137 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Alx3O70137 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Alx3O70137 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alx3O70137 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alx3O70137 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alx3O70137 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Alx3O70137 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Alx3O70137 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Alx3O70137 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Alx3O70137 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.83□□□□□ -0.04
Alx3O70137 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Alx3O70137 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.83□□□□□ -0.04
Alx3O70137 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.83□□□□□ -0.04
Alx3O70137 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.83□□□□□ -0.04
Alx3O70137 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Gm10812-201ENSMUST00000099864 546 ntBASIC14.83□□□□□ -0.04
Alx3O70137 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Alx3O70137 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.83□□□□□ -0.04
Alx3O70137 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx3O70137 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx3O70137 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Alx3O70137 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx3O70137 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx3O70137 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx3O70137 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx3O70137 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Alx3O70137 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.82□□□□□ -0.04
Alx3O70137 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx3O70137 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.82□□□□□ -0.04
Alx3O70137 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.82□□□□□ -0.04
Alx3O70137 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.82□□□□□ -0.04
Alx3O70137 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx3O70137 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.82□□□□□ -0.04
Alx3O70137 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.82□□□□□ -0.04
Alx3O70137 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Alx3O70137 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.82□□□□□ -0.04
Alx3O70137 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx3O70137 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx3O70137 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Alx3O70137 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx3O70137 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx3O70137 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Alx3O70137 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx3O70137 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx3O70137 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx3O70137 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Alx3O70137 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Alx3O70137 Gm13186-201ENSMUST00000118031 316 ntBASIC14.81□□□□□ -0.04
Alx3O70137 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms